RiceData >>> LOC_Os10g39420 <<< 日本晴
在基因组浏览器中显示LOC_Os10g39420
·基因鉴定
位点名称: LOC_Os10g39420
基因产物: CAMK_CAMK_like.8 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
·基因特征
染色体: Chr10
基因位置: 21027454-21032225 ( + strand)
可变剪接(0个): LOC_Os10g39420.1
剪接本 CDS坐标 核苷酸长度 预测蛋白长度 预测分子量 预测pI 序列
LOC_Os10g39420.121028207 ~ 210319091605535curingcuring下载
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·基因结构
·GO电子注释(Gene Ontology)
LOC_Os10g39420.1
GO登录号 类型 名称(描述) Code With
GO:0016020细胞组成membraneIEATAIR:AT2G17290
GO:0009719生物学进程response to endogenous stimulusIEATAIR:AT2G17290
GO:0007165生物学进程signal transductionIEATAIR:AT2G17290
GO:0009058生物学进程biosynthetic processIEATAIR:AT2G17290
GO:0006464生物学进程protein modification processIEATAIR:AT2G17290
GO:0016301分子功能kinase activityIEATAIR:AT2G17290
GO:0006810生物学进程transportIEATAIR:AT2G17290
GO:0009987生物学进程cellular processIEATAIR:AT2G17290
GO:0005515分子功能protein bindingIEATAIR:AT2G17290
GO:0005829细胞组成cytosolIEATAIR:AT2G17290
GO:0005886细胞组成plasma membraneIEATAIR:AT2G17290
·Interpro蛋白功能预测
LOC_Os10g39420.1
方法 登录号 名称(描述) Interpro登录号 起始匹配位点 终止匹配位点 E值
Gene3DG3DSA:3.30.200.20no descriptionN/A681539.9e-24
Gene3DG3DSA:1.10.510.10no descriptionN/A1563562.3e-56
Gene3DG3DSA:1.10.238.10no descriptionIPR0119923585078.5e-30
HMMPantherPTHR22982:SF13CALCIUM-DEPENDENT PROTEIN KINASEIPR0206421215115e-244
HMMPantherPTHR22982CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE-RELATEDIPR0206361215115e-244
HMMPfamPF00069PkinaseIPR017442733313.4e-67
HMMPfamPF00036efhandIPR0182484835091.8e-07
HMMSmartSM00220no descriptionIPR002290733318.6e-93
HMMSmartSM00219no descriptionIPR020635733315.6e-11
HMMSmartSM00054no descriptionIPR0020484484760.82
HMMSmartSM00054no descriptionIPR0020484825101.7e-05
PatternScanPS00107PROTEIN_KINASE_ATPIPR01744179106N/A
PatternScanPS00108PROTEIN_KINASE_STIPR008271193205N/A
PatternScanPS00018EF_HAND_1IPR018247491503N/A
ProfileScanPS50011PROTEIN_KINASE_DOMIPR0007197333145.418
ProfileScanPS50222EF_HAND_2IPR0182493744097.456
ProfileScanPS50222EF_HAND_2IPR0182494444778.432
ProfileScanPS50222EF_HAND_2IPR01824947851313.174
SegsegsegN/A4052N/A
superfamilySSF56112Protein kinase-like (PK-like)IPR011009483587.4e-85
superfamilySSF47473EF-handN/A2955079.8e-54
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