RiceData >>> LOC_Os03g56110 <<< 日本晴
在基因组浏览器中显示LOC_Os03g56110
·基因鉴定
位点名称: LOC_Os03g56110
基因产物: homeobox protein knotted-1, putative, expressed
·基因特征
染色体: Chr03
基因位置: 31964582-31970527 ( + strand)
可变剪接(0个): LOC_Os03g56110.1LOC_Os03g56110.2
剪接本 CDS坐标 核苷酸长度 预测蛋白长度 预测分子量 预测pI 序列
LOC_Os03g56110.131964878 ~ 319700051026342curingcuring下载
LOC_Os03g56110.231964878 ~ 319700051011337curingcuring下载
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·基因结构
·GO电子注释(Gene Ontology)
LOC_Os03g56110.1LOC_Os03g56110.2
GO登录号 类型 名称(描述) Code With
GO:0007275生物学进程multicellular organismal developmentIEATAIR:AT4G08150
GO:0030154生物学进程cell differentiationIEATAIR:AT4G08150
GO:0005634细胞组成nucleusIEATAIR:AT4G08150
GO:0005515分子功能protein bindingIEATAIR:AT4G08150
GO:0009058生物学进程biosynthetic processIEATAIR:AT4G08150
GO:0006139生物学进程nucleobase, nucleoside, nucleotide and nucleic acid metabolic processIEATAIR:AT4G08150
GO:0003700分子功能sequence-specific DNA binding transcription factor activityIEATAIR:AT4G08150
GO:0007275生物学进程multicellular organismal developmentIEATAIR:AT4G08150
GO:0030154生物学进程cell differentiationIEATAIR:AT4G08150
GO:0005634细胞组成nucleusIEATAIR:AT4G08150
GO:0005515分子功能protein bindingIEATAIR:AT4G08150
GO:0009058生物学进程biosynthetic processIEATAIR:AT4G08150
GO:0006139生物学进程nucleobase, nucleoside, nucleotide and nucleic acid metabolic processIEATAIR:AT4G08150
GO:0003700分子功能sequence-specific DNA binding transcription factor activityIEATAIR:AT4G08150
·Interpro蛋白功能预测
LOC_Os03g56110.1LOC_Os03g56110.2
方法 登录号 名称(描述) Interpro登录号 起始匹配位点 终止匹配位点 E值
Gene3DG3DSA:1.10.10.60no descriptionIPR0122872242865.1e-20
Gene3DG3DSA:1.10.10.60no descriptionIPR0122872292915.1e-20
HMMPantherPTHR11850HOMEOBOX PROTEIN TRANSCRIPTION FACTORSN/A2152851.6e-43
HMMPantherPTHR11850HOMEOBOX PROTEIN TRANSCRIPTION FACTORSN/A2202901.6e-43
HMMPfamPF03790KNOX1IPR005540821241.6e-19
HMMPfamPF03790KNOX1IPR005540821241.5e-19
HMMPfamPF03791KNOX2IPR0055411431872.5e-18
HMMPfamPF03791KNOX2IPR0055411431875e-18
HMMPfamPF03789ELKIPR0055392032239.2e-10
HMMPfamPF03789ELKIPR0055392082289.3e-10
HMMPfamPF00046HomeoboxIPR0013562482825.2e-07
HMMPfamPF00046HomeoboxIPR0013562532875.4e-07
HMMSmartSM00389no descriptionIPR0013562242891.2e-11
HMMSmartSM00389no descriptionIPR0013562292941.2e-11
PatternScanPS00027HOMEOBOX_1IPR017970260283N/A
PatternScanPS00027HOMEOBOX_1IPR017970265288N/A
ProfileScanPS51213ELKIPR0055392022229.324
ProfileScanPS51213ELKIPR0055392072279.324
ProfileScanPS50071HOMEOBOX_2IPR00135622228512.503
ProfileScanPS50071HOMEOBOX_2IPR00135622729012.503
SegsegsegN/A317N/A
SegsegsegN/A317N/A
SegsegsegN/A5169N/A
SegsegsegN/A5169N/A
SegsegsegN/A139152N/A
SegsegsegN/A139152N/A
SegsegsegN/A300320N/A
SegsegsegN/A305325N/A
superfamilySSF46689Homeodomain-likeIPR0090572233002.1e-18
superfamilySSF46689Homeodomain-likeIPR0090572283052.1e-18
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